STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0933Sulfatase domain protein; Identified by match to protein family HMM PF00884. (644 aa)    
Predicted Functional Partners:
FSU_0935
Sulfatase domain protein; Identified by match to protein family HMM PF00884.
 
    
0.792
FSU_0934
Putative transporter; Identified by similarity to GB:AAN68395.1.
       0.773
FSU_0459
Conserved hypothetical protein.
  
     0.555
FSU_0936
Hypothetical protein; Identified by glimmer; putative.
       0.519
FSU_0286
Fimbriae-associated domain protein; Identified by similarity to GP:3929312.
  
     0.511
FSU_2504
Hypothetical protein; Identified by glimmer; putative.
  
     0.493
FSU_1954
Conserved domain protein; Identified by similarity to GB:AAO52466.1; match to protein family HMM TIGR02148.
  
     0.477
FSU_2610
Glycosyl hydrolase-like protein; Identified by similarity to GB:CAD86595.1; match to protein family HMM PF00754.
  
     0.469
FSU_0167
Identified by similarity to SP:P35160; similarity to SP:P45523; match to protein family HMM PF00578; match to protein family HMM PF08534.
  
     0.458
FSU_1110
Nuclease, ATP-dependent, OLD family.
  
     0.456
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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