STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsECell division ABC transporter, ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (229 aa)    
Predicted Functional Partners:
FSU_2425
Putative cell division ABC transporter, permease protein FtsX; Identified by similarity to SP:P10122; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 0.979
surA
Peptidyl-prolyl cis-trans isomerase SurA; Identified by similarity to SP:P21202; match to protein family HMM PF00639; match to protein family HMM PF09312.
       0.792
FSU_0942
Conserved domain protein; Identified by similarity to SP:Q46105.
       0.779
hrpA
ATP-dependent helicase HrpA; Identified by similarity to SP:P43329; match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717.
       0.773
FSU_0939
Hypothetical protein; Identified by glimmer; putative.
       0.697
FSU_3072
Amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726.
      0.640
FSU_2426
Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551.
 
   
 0.534
FSU_2244
Putative cell-division initiation protein DivIVA; Identified by similarity to PIR:B69616; match to protein family HMM PF05103; match to protein family HMM TIGR03544.
  
  
 0.525
FSU_0601
Iron compound ABC transporter, ATP-binding protein; Identified by similarity to SP:P15031; match to protein family HMM PF00005.
  
     0.508
scpA
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
    0.504
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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