STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_0981Conserved domain protein; Identified by match to protein family HMM PF09603; match to protein family HMM TIGR02145. (572 aa)    
Predicted Functional Partners:
FSU_2932
Cadherin domain protein; Identified by match to protein family HMM PF00028.
  
   0.723
FSU_2931
Cadherin domain protein; Identified by match to protein family HMM PF00028.
  
   0.715
FSU_0982
Putative lipoprotein; Identified by match to protein family HMM PF09603; match to protein family HMM TIGR02145.
 
  
0.650
FSU_1266
Conserved domain protein; Identified by similarity to GB:AAP26486.1.
  
    0.650
FSU_0983
Putative lipoprotein; Identified by match to protein family HMM PF09603; match to protein family HMM TIGR02145.
 
    
0.615
FSU_3272
Conserved domain protein; Identified by match to protein family HMM PF04685.
  
     0.594
purT
Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.
       0.533
FSU_0364
Diacylglycerol kinase domain protein; Identified by match to protein family HMM PF00609; match to protein family HMM PF00781.
  
     0.512
guaA
GMP synthase; Identified by similarity to SP:P04079; match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00888.
     
  0.510
FSU_0522
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
    0.506
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.