STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1000Thiol-disulfide oxidoreductase-like protein; Identified by similarity to SP:P35160; match to protein family HMM PF08534. (180 aa)    
Predicted Functional Partners:
FSU_0622
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.658
FSU_0522
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
 
 
   0.657
FSU_0382
Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.
  
     0.622
FSU_1095
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
     0.613
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
    
 0.585
trxB
Thioredoxin-disulfide reductase; Identified by similarity to SP:P50971; match to protein family HMM PF01134; match to protein family HMM PF07992.
  
 0.579
FSU_2502
Fibro-slime domain protein; Identified by match to protein family HMM TIGR02148.
  
     0.577
FSU_0816
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.566
FSU_1998
Putative membrane protein; Identified by similarity to GB:AAP05710.1.
  
 
 0.553
FSU_1150
Capsular polysaccharide biosynthesis protein; Identified by similarity to GB:AAC69533.1; match to protein family HMM PF01554; match to protein family HMM PF01943.
  
     0.546
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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