Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
FSU_1098Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065. (618 aa)    
Predicted Functional Partners:
FSU_1097
Anti-anti-sigma factor-like protein.
       0.787
FSU_0816
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.726
FSU_0622
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.717
FSU_0718
Putative membrane protein.
  
     0.702
FSU_2502
Fibro-slime domain protein; Identified by match to protein family HMM TIGR02148.
  
     0.666
FSU_0522
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
    0.658
FSU_1155
Conserved hypothetical protein; Identified by similarity to GB:CAD78756.1.
 
  
  0.649
FSU_1310
Hypothetical protein; Identified by glimmer; putative.
  
     0.647
FSU_0631
Hypothetical protein; Identified by glimmer; putative.
  
     0.640
FSU_2721
Hypothetical protein; Identified by glimmer; putative.
  
     0.631
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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