Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1195Endo-1,4-beta-xylanase; Identified by similarity to SP:P10478; match to protein family HMM PF00331. (467 aa)    
Predicted Functional Partners:
FSU_2269
Xylanase/xylosidase; Identified by match to protein family HMM PF03422; match to protein family HMM PF04616.
 
  
  0.931
FSU_2898
Putative lipoprotein.
 
     0.822
FSU_2520
Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.816
FSU_2741
Putative xylanase; Identified by match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.804
FSU_2521
Glycosyl hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.801
FSU_3045
Lipase/acylhydrolase, GDSL family; Identified by match to protein family HMM PF00657.
  
 
  0.799
FSU_3190
Glycoside hydrolase, family 43; Identified by match to protein family HMM PF04616; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.791
FSU_3006
Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P35811; match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.785
FSU_2274
Xylanase/xylosidase; Identified by match to protein family HMM PF03422; match to protein family HMM PF04616.
 
  
  0.780
FSU_0192
Putative xylanase; Identified by similarity to SP:P45796; match to protein family HMM PF03422; match to protein family HMM PF04616.
 
  
  0.775
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.