FSU_1222 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

FSU_1222

Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773. (518 aa)

Predicted Functional Partners:

FSU_2175

0.952

FSU_1223

0.846

ppa

0.535

FSU_1224

0.496

sodB

0.481

FSU_1593

0.435

FSU_0975

0.421

FSU_0716

0.411

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0716	FSU_1222	FSU_0716	FSU_1222	Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022; match to protein family HMM PF08241; match to protein family HMM PF08242.	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	0.411
FSU_0716	FSU_1593	FSU_0716	FSU_1593	Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022; match to protein family HMM PF08241; match to protein family HMM PF08242.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.410
FSU_0716	FSU_2175	FSU_0716	FSU_2175	Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022; match to protein family HMM PF08241; match to protein family HMM PF08242.	Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525.	0.484
FSU_0975	FSU_1222	FSU_0975	FSU_1222	Putative metal ABC transporter, ATP-binding protein; Identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005.	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	0.421
FSU_1222	FSU_0716	FSU_1222	FSU_0716	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022; match to protein family HMM PF08241; match to protein family HMM PF08242.	0.411
FSU_1222	FSU_0975	FSU_1222	FSU_0975	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Putative metal ABC transporter, ATP-binding protein; Identified by similarity to SP:Q9XDA6; match to protein family HMM PF00005.	0.421
FSU_1222	FSU_1223	FSU_1222	FSU_1223	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Transcriptional regulator, ArsR family; Identified by similarity to PIR:T44366; match to protein family HMM PF01022.	0.846
FSU_1222	FSU_1224	FSU_1222	FSU_1224	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Hypothetical protein; Identified by glimmer; putative.	0.496
FSU_1222	FSU_1593	FSU_1222	FSU_1593	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.435
FSU_1222	FSU_2175	FSU_1222	FSU_2175	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525.	0.952
FSU_1222	ppa	FSU_1222	FSU_3124	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Inorganic diphosphatase; Identified by similarity to SP:P38576; match to protein family HMM PF00719.	0.535
FSU_1222	sodB	FSU_1222	FSU_0477	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.481
FSU_1223	FSU_1222	FSU_1223	FSU_1222	Transcriptional regulator, ArsR family; Identified by similarity to PIR:T44366; match to protein family HMM PF01022.	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	0.846
FSU_1223	FSU_1224	FSU_1223	FSU_1224	Transcriptional regulator, ArsR family; Identified by similarity to PIR:T44366; match to protein family HMM PF01022.	Hypothetical protein; Identified by glimmer; putative.	0.496
FSU_1224	FSU_1222	FSU_1224	FSU_1222	Hypothetical protein; Identified by glimmer; putative.	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	0.496
FSU_1224	FSU_1223	FSU_1224	FSU_1223	Hypothetical protein; Identified by glimmer; putative.	Transcriptional regulator, ArsR family; Identified by similarity to PIR:T44366; match to protein family HMM PF01022.	0.496
FSU_1593	FSU_0716	FSU_1593	FSU_0716	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022; match to protein family HMM PF08241; match to protein family HMM PF08242.	0.410
FSU_1593	FSU_1222	FSU_1593	FSU_1222	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	0.435
FSU_2175	FSU_0716	FSU_2175	FSU_0716	Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525.	Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022; match to protein family HMM PF08241; match to protein family HMM PF08242.	0.484
FSU_2175	FSU_1222	FSU_2175	FSU_1222	Heavy metal translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525.	Putative heavy-metal permease; Identified by match to protein family HMM PF00403; match to protein family HMM PF03773.	0.952

page 1 of 2

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About