Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FSU_1266Conserved domain protein; Identified by similarity to GB:AAP26486.1. (452 aa)    
Predicted Functional Partners:
FSU_1267
Insecticidal toxin-like protein.
 
     0.863
FSU_1265
Insecticidal toxin-like protein; Identified by match to protein family HMM PF01839; match to protein family HMM PF05593; match to protein family HMM TIGR03696.
 
    0.811
FSU_1004
Hypothetical protein; Identified by glimmer; putative.
  
     0.666
FSU_0981
Conserved domain protein; Identified by match to protein family HMM PF09603; match to protein family HMM TIGR02145.
  
    0.650
FSU_1668
Putative lipoprotein; Identified by match to protein family HMM PF00300.
  
    0.554
FSU_0931
Putative aspartoacylase; Identified by similarity to SP:P46446; match to protein family HMM PF04952.
  
     0.488
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
    
  0.479
FSU_0196
Putative mannanase; Identified by similarity to SP:P51529; match to protein family HMM PF00150; match to protein family HMM PF02018; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.472
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; Identified by similarity to GB:AAG22121.1; match to protein family HMM PF00953.
     
  0.466
FSU_2932
Cadherin domain protein; Identified by match to protein family HMM PF00028.
  
     0.466
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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