FSU_1330 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

FSU_1330

Conserved hypothetical protein; Identified by similarity to GB:AAO79009.1; match to protein family HMM PF00529. (332 aa)

Predicted Functional Partners:

FSU_1331

0.982

FSU_1328

0.951

FSU_1329

0.945

FSU_2056

0.826

FSU_1335

0.805

FSU_0700

0.771

FSU_0701

0.751

FSU_2553

0.750

FSU_1095

0.691

FSU_1444

0.691

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
FSU_0700	FSU_0701	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.948
FSU_0700	FSU_1095	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.595
FSU_0700	FSU_1330	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Conserved hypothetical protein; Identified by similarity to GB:AAO79009.1; match to protein family HMM PF00529.	0.771
FSU_0700	FSU_1331	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.865
FSU_0700	FSU_2056	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.838
FSU_0700	FSU_2553	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.736
FSU_0701	FSU_0700	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.948
FSU_0701	FSU_1095	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.682
FSU_0701	FSU_1328	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Putative transporter; Identified by similarity to GB:AAQ65338.1.	0.403
FSU_0701	FSU_1330	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Conserved hypothetical protein; Identified by similarity to GB:AAO79009.1; match to protein family HMM PF00529.	0.751
FSU_0701	FSU_1331	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.791
FSU_0701	FSU_2056	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.803
FSU_0701	FSU_2553	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.651
FSU_1095	FSU_0700	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.595
FSU_1095	FSU_0701	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.682
FSU_1095	FSU_1330	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Conserved hypothetical protein; Identified by similarity to GB:AAO79009.1; match to protein family HMM PF00529.	0.691
FSU_1095	FSU_1331	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.540
FSU_1095	FSU_2056	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.540
FSU_1095	FSU_2553	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.682
FSU_1328	FSU_0701	Putative transporter; Identified by similarity to GB:AAQ65338.1.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.403

page 1 of 4

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About