Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1334Conserved hypothetical protein; Identified by similarity to GB:AAM05601.1; match to protein family HMM PF09359. (272 aa)    
Predicted Functional Partners:
FSU_1337
Conserved hypothetical protein; Identified by similarity to GB:BAB97452.1.
 
    0.956
FSU_1335
Hypothetical protein; Identified by glimmer; putative.
       0.777
FSU_3317
Putative lipoprotein.
 
     0.744
FSU_0578
Putative lipoprotein.
 
     0.733
FSU_1198
Conserved domain protein.
 
     0.720
FSU_1954
Conserved domain protein; Identified by similarity to GB:AAO52466.1; match to protein family HMM TIGR02148.
  
     0.710
FSU_2415
Putative lipoprotein; Identified by match to protein family HMM PF08757.
 
     0.705
FSU_1953
Conserved domain protein; Identified by similarity to GB:CAD69025.1; match to protein family HMM TIGR02148.
  
     0.701
FSU_2610
Glycosyl hydrolase-like protein; Identified by similarity to GB:CAD86595.1; match to protein family HMM PF00754.
  
     0.695
FSU_0809
Glycosyl hydrolase, family 9; Identified by similarity to SP:P26221; match to protein family HMM PF00759.
  
     0.684
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.