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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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FSU_1363Putative very short patch repair protein; Identified by match to protein family HMM PF03852; match to protein family HMM TIGR00632. (168 aa)    
Predicted Functional Partners:
FSU_1369
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
 
      0.899
dcm
Cytosine specific DNA methyltransferase; Identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
 
   
 0.779
FSU_2329
Conserved domain protein; Identified by similarity to GB:BAC15296.1.
 
     0.741
FSU_1362
Conserved hypothetical protein; Identified by similarity to PIR:A96992.
 
     0.680
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.549
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
   
 
 0.432
FSU_1361
RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.
       0.406
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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