STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1372Low molecular weight phosphotyrosine protein phosphatase; Identified by match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (179 aa)    
Predicted Functional Partners:
ptP
Low molecular weight protein tyrosine-phosphatase; Identified by similarity to SP:O52787; match to protein family HMM PF01451; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 
0.925
FSU_0619
Conserved hypothetical protein; Identified by similarity to GB:AAS08109.1.
     
 0.907
FSU_1370
Identified by match to protein family HMM PF00255; Belongs to the glutathione peroxidase family.
  
  
 0.778
FSU_1371
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
       0.776
maf
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      0.728
FSU_1369
Hydrolase, NUDIX family; Identified by match to protein family HMM PF00293.
       0.556
FSU_0181
Putative tyrosine-protein kinase; Identified by similarity to SP:P38134; match to protein family HMM PF02706; match to protein family HMM TIGR01007.
  
 
 0.451
FSU_2077
Putative tyrosine-protein kinase; Identified by similarity to SP:P38134; match to protein family HMM PF02706; match to protein family HMM TIGR01007.
  
 
 0.451
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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