STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
etfBElectron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012. (293 aa)    
Predicted Functional Partners:
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:O85692; match to protein family HMM PF00766; match to protein family HMM PF01012.
 0.999
FSU_1397
Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
 
 0.995
FSU_1403
Conserved domain protein; Identified by similarity to GB:AAO76913.1.
  
 
 0.906
FSU_2156
Phosphoadenosine phosphosulfate reductase domain protein; Identified by match to protein family HMM PF01507.
  
 0.880
gltA_2
Glutamate synthase (NADPH), homotetrameric; Identified by similarity to SP:P09832; match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01316.
  
 0.818
gltD
Glutamate synthase, small subunit; Identified by similarity to GB:AAO75659.1; match to protein family HMM PF07992; match to protein family HMM TIGR01317.
  
 0.818
nifJ
Pyruvate synthase; Identified by similarity to SP:P52647; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
 0.807
FSU_0745
Conserved hypothetical protein; Identified by similarity to GB:AAM02858.1; match to protein family HMM PF01266.
  
 
 0.765
FSU_2657
Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF07992; match to protein family HMM TIGR02032.
  
 
 0.765
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
 0.661
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.