Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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FSU_1411Hypothetical protein; Identified by glimmer; putative. (382 aa)    
Predicted Functional Partners:
secDF
Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
     
  0.546
FSU_1435
licC domain protein; Identified by similarity to PIR:H98014.
  
  
 0.524
tagD
Glycerol-3-phosphate cytidylyltransferase; Identified by similarity to SP:P27623; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01518.
  
  
 0.493
FSU_1416
Putative rhamnosyltransferase; Identified by similarity to PIR:T00087; match to protein family HMM PF00535.
    
  0.478
FSU_1412
Capsular polysaccharide biosynthesis protein; Identified by similarity to GB:AAC69533.1; match to protein family HMM PF01943.
  
    0.477
FSU_1409
N-acetylmannosaminyltransferase; Identified by similarity to SP:P27620; match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family.
  
 0.467
FSU_1413
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase; Identified by similarity to SP:P27621; match to protein family HMM PF04464.
       0.448
FSU_1414
Putative membrane protein.
       0.448
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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