Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tagDGlycerol-3-phosphate cytidylyltransferase; Identified by similarity to SP:P27623; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01518. (136 aa)    
Predicted Functional Partners:
FSU_1413
Putative CDP-glycerol:glycerophosphate glycerophosphotransferase; Identified by similarity to SP:P27621; match to protein family HMM PF04464.
 
  
 0.949
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+ ]; Identified by similarity to SP:P46919; match to protein family HMM PF01210; match to protein family HMM PF07479; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.888
FSU_1414
Putative membrane protein.
       0.773
FSU_1412
Capsular polysaccharide biosynthesis protein; Identified by similarity to GB:AAC69533.1; match to protein family HMM PF01943.
       0.730
FSU_1416
Putative rhamnosyltransferase; Identified by similarity to PIR:T00087; match to protein family HMM PF00535.
       0.706
FSU_1438
Putative phosphoenolpyruvate decarboxylase; Identified by similarity to SP:O86938; match to protein family HMM PF02775; match to protein family HMM TIGR03297.
  
 
 0.702
FSU_1417
Putative rhamnosyl transferase; Identified by similarity to PIR:S34966; match to protein family HMM PF00535.
       0.624
FSU_1411
Hypothetical protein; Identified by glimmer; putative.
  
  
 0.493
FSU_1439
Putative phosphoenolpyruvate mutase; Identified by similarity to GB:AAG26465.1; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02320.
    
  0.423
FSU_0360
Identified by match to protein family HMM PF00483.
    
  0.417
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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