Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1425UDP-glucuronate decarboxylase; Identified by similarity to GB:AAM22494.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993. (340 aa)    
Predicted Functional Partners:
FSU_1426
Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Identified by match to protein family HMM PF01128; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
 
   
 0.928
FSU_1436
Putative polysaccharide biosynthesis protein; Identified by similarity to SP:P39630; match to protein family HMM PF01073; match to protein family HMM PF01370.
 
     0.851
FSU_1427
Glycerophosphoryl diester phosphodiesterase family protein; Identified by match to protein family HMM PF03009.
  
  
 0.788
FSU_1430
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
  
 
  0.782
FSU_1428
Conserved hypothetical protein; Identified by similarity to GB:AAP76676.1.
  
    0.776
FSU_1429
Capsular polysaccharide biosynthesis protein; Identified by similarity to GB:AAK20704.1; match to protein family HMM PF04488.
  
    0.776
FSU_1431
Putative membrane protein.
       0.773
FSU_1433
Putative licD protein; Identified by similarity to GB:AAL77432.1; match to protein family HMM PF04991.
 
     0.720
FSU_2858
Putative dehydrogenase; Identified by similarity to SP:P77398; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
     0.706
nifJ
Pyruvate synthase; Identified by similarity to SP:P52647; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
    
  0.627
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.