Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ptsHPhosphocarrier protein HPr; Identified by similarity to SP:P23537; match to protein family HMM PF00381; match to protein family HMM TIGR01003. (90 aa)    
Predicted Functional Partners:
ptsI
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 0.998
FSU_0127
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392; match to protein family HMM PF08279.
  
 
 0.838
FSU_1446
Putative soluble lytic murein transglycosylase; Identified by similarity to SP:P03810; match to protein family HMM PF01464.
  
    0.796
FSU_0614
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
   
 
 0.794
FSU_1728
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
   
 
 0.794
FSU_1449
Identified by match to protein family HMM PF02470.
       0.791
hprK
Putative HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).
 
 
 
 0.785
FSU_2059
PTS system, IIA component; Identified by match to protein family HMM PF00359.
 
 
 0.673
FSU_2392
Carbohydrate kinase, PfkB family; Identified by match to protein family HMM PF00294.
  
 
 0.657
rpsG
Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
  
    0.647
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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