STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
FSU_1485Putative D-methionine transport system permease protein MetI; Identified by similarity to SP:P31547; match to protein family HMM PF00528. (228 aa)    
Predicted Functional Partners:
FSU_1486
Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 0.999
FSU_1487
Putative D-methionine-binding lipoprotein MetQ; Identified by similarity to GB:AAO58686.1; match to protein family HMM PF03180.
 0.999
FSU_2984
Hypothetical protein; Identified by glimmer; putative.
  
 0.861
FSU_1484
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
       0.520
FSU_1488
Identified by match to protein family HMM PF01381.
  
    0.509
FSU_1002
Putative 5,10-methylenetetrahydrofolate reductase; Identified by similarity to GB:AAF64321.1; match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family.
   
    0.492
FSU_2076
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
  0.411
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
    
  0.411
FSU_1466
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
     
  0.408
FSU_3055
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
     
  0.408
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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