STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1487Putative D-methionine-binding lipoprotein MetQ; Identified by similarity to GB:AAO58686.1; match to protein family HMM PF03180. (264 aa)    
Predicted Functional Partners:
FSU_1485
Putative D-methionine transport system permease protein MetI; Identified by similarity to SP:P31547; match to protein family HMM PF00528.
 0.999
FSU_1486
Putative D-methionine transport ATP-binding protein metN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
 0.999
FSU_1484
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
       0.520
FSU_0558
O-acetylhomoserine sulfhydrylase; Identified by similarity to PIR:T44655; match to protein family HMM PF01053; match to protein family HMM TIGR01326.
  
    0.514
FSU_0565
Cys/Met metabolism PLP-dependent enzyme; Identified by match to protein family HMM PF01053.
  
    0.514
FSU_1526
O-acetylhomoserine sulfhydrylase; Identified by similarity to PIR:T44655; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326.
  
    0.514
FSU_1584
O-acetylhomoserine sulfhydrylase; Identified by similarity to PIR:T44655; match to protein family HMM PF01053; match to protein family HMM TIGR01326.
  
    0.514
FSU_1488
Identified by match to protein family HMM PF01381.
       0.509
FSU_1002
Putative 5,10-methylenetetrahydrofolate reductase; Identified by similarity to GB:AAF64321.1; match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.414
FSU_1466
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
     
  0.408
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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