Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FSU_1529Conserved domain protein; Identified by similarity to PIR:D72594. (360 aa)    
Predicted Functional Partners:
FSU_0738
Cellulase-like protein; Identified by similarity to GB:BAA12070.1.
  
     0.701
FSU_1110
Nuclease, ATP-dependent, OLD family.
  
     0.700
FSU_2368
Conserved domain protein; Identified by similarity to PIR:D83762; match to protein family HMM TIGR02171.
  
     0.693
FSU_1954
Conserved domain protein; Identified by similarity to GB:AAO52466.1; match to protein family HMM TIGR02148.
  
     0.680
FSU_1728
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
  
     0.679
FSU_0809
Glycosyl hydrolase, family 9; Identified by similarity to SP:P26221; match to protein family HMM PF00759.
  
     0.671
FSU_2304
Identified by match to protein family HMM PF01522.
  
     0.654
FSU_2397
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.653
FSU_0810
Glycosyl hydrolase, family 9; Identified by similarity to SP:P04954; match to protein family HMM PF00041; match to protein family HMM PF00759.
  
     0.650
FSU_2619
Putative lipoprotein, TIGR02171; Identified by match to protein family HMM TIGR02171.
  
     0.646
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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