Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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co-expression
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FSU_1542Putative ABC transporter, periplasmic substrate-binding protein; Identified by similarity to GB:AAM01816.1; match to protein family HMM PF04069. (342 aa)    
Predicted Functional Partners:
FSU_1540
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.985
FSU_1541
ABC transporter, ATP-binding protein; Identified by similarity to SP:P38046; match to protein family HMM PF00005.
 
 0.985
FSU_1554
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.940
FSU_1555
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.940
FSU_1552
Conserved hypothetical protein; Identified by similarity to GB:AAO15990.1.
  
     0.761
FSU_1551
Conserved hypothetical protein; Identified by similarity to GB:AAO15990.1.
  
     0.759
FSU_1543
Hypothetical protein; Identified by glimmer; putative.
       0.732
FSU_2295
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518.
    
 0.581
FSU_1628
Putative nitrogen regulatory protein P-II; Identified by similarity to SP:Q52905.
    
 
 0.491
FSU_0147
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518.
    
 0.479
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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