STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1548Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. (166 aa)    
Predicted Functional Partners:
maf
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
  
   0.900
FSU_1547
FeMo cofactor biosynthesis domain protein; Identified by similarity to SP:P11067; match to protein family HMM PF02579.
  
    0.776
FSU_1549
Identified by similarity to SP:Q9XEA8; match to protein family HMM PF00291.
  
    0.735
argA
Amino-acid N-acetyltransferase; Identified by similarity to SP:P08205; match to protein family HMM PF00583; match to protein family HMM PF00696; match to protein family HMM TIGR01890; Belongs to the acetyltransferase family.
    
 0.613
aroKB
Shikimate kinase/3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
    
  0.578
FSU_1626
Identified by match to protein family HMM PF01564.
    
  0.571
FSU_0157
Peptidase, M3 family; Identified by match to protein family HMM PF01432; match to protein family HMM TIGR02289.
      0.513
FSU_0999
Conserved domain protein; Identified by similarity to GB:AAK57643.1.
  
     0.420
FSU_1550
Hypothetical protein; Identified by glimmer; putative.
       0.405
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.