STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1552Conserved hypothetical protein; Identified by similarity to GB:AAO15990.1. (362 aa)    
Predicted Functional Partners:
FSU_1555
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.972
FSU_1554
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.971
FSU_1540
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.939
FSU_1541
ABC transporter, ATP-binding protein; Identified by similarity to SP:P38046; match to protein family HMM PF00005.
 
 0.923
FSU_1542
Putative ABC transporter, periplasmic substrate-binding protein; Identified by similarity to GB:AAM01816.1; match to protein family HMM PF04069.
  
     0.761
FSU_1544
Putative nitrogenase molybdenum-iron protein, beta subunit; Identified by similarity to SP:P71527; match to protein family HMM PF00148.
  
    0.752
FSU_1535
Putative nitrogenase molybdenum-iron protein, alpha subunit; Identified by similarity to SP:P00467; match to protein family HMM PF00148.
  
    0.750
FSU_1534
Putative nitrogenase, molybdenum-iron protein, beta subunit; Identified by similarity to SP:P11347; match to protein family HMM PF00148.
  
    0.748
FSU_1545
Putative nitrogenase molybdenum-iron protein, alpha subunit; Identified by similarity to SP:P55170; match to protein family HMM PF00148.
  
    0.735
FSU_1553
Cysteine synthase family protein; Identified by similarity to GB:AAG01002.1; match to protein family HMM PF00291.
     
 0.733
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (20%) [HD]