STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1559Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687. (396 aa)    
Predicted Functional Partners:
FSU_1558
Conserved hypothetical protein; Identified by similarity to GB:AAN24702.1.
       0.773
FSU_2178
Putative membrane protein; Identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185.
  
     0.661
FSU_2179
Putative cobalt ABC transporter, permease protein; Identified by match to protein family HMM PF02361.
  
     0.578
FSU_1552
Conserved hypothetical protein; Identified by similarity to GB:AAO15990.1.
 
     0.545
FSU_2180
Putative cobalt ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.540
FSU_1551
Conserved hypothetical protein; Identified by similarity to GB:AAO15990.1.
 
     0.538
FSU_1557
Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
       0.468
FSU_1544
Putative nitrogenase molybdenum-iron protein, beta subunit; Identified by similarity to SP:P71527; match to protein family HMM PF00148.
  
     0.456
FSU_1534
Putative nitrogenase, molybdenum-iron protein, beta subunit; Identified by similarity to SP:P11347; match to protein family HMM PF00148.
  
     0.449
FSU_1535
Putative nitrogenase molybdenum-iron protein, alpha subunit; Identified by similarity to SP:P00467; match to protein family HMM PF00148.
  
     0.445
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.