prmA protein (Fibrobacter succinogenes) - STRING interaction network

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prmA

Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241. (280 aa)

Predicted Functional Partners:

dnaJ

0.857

rplK

0.857

FSU_0978

0.752

FSU_1090

0.551

FSU_1562

0.550

rsmB

0.448

putP

0.423

rlmH

0.416

FSU_0786

0.412

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0786	prmA	FSU_0786	FSU_1561	Conserved hypothetical protein; Identified by similarity to PIR:C86831; match to protein family HMM PF01170.	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	0.412
FSU_0978	dnaJ	FSU_0978	FSU_0184	Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	0.512
FSU_0978	prmA	FSU_0978	FSU_1561	Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	0.752
FSU_1090	prmA	FSU_1090	FSU_1561	Identified by match to protein family HMM PF01207.	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	0.551
FSU_1562	prmA	FSU_1562	FSU_1561	Fic family protein; Identified by match to protein family HMM PF02661.	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	0.550
dnaJ	FSU_0978	FSU_0184	FSU_0978	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	0.512
dnaJ	prmA	FSU_0184	FSU_1561	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	0.857
dnaJ	rplK	FSU_0184	FSU_1738	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.823
prmA	FSU_0786	FSU_1561	FSU_0786	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Conserved hypothetical protein; Identified by similarity to PIR:C86831; match to protein family HMM PF01170.	0.412
prmA	FSU_0978	FSU_1561	FSU_0978	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.	0.752
prmA	FSU_1090	FSU_1561	FSU_1090	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Identified by match to protein family HMM PF01207.	0.551
prmA	FSU_1562	FSU_1561	FSU_1562	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Fic family protein; Identified by match to protein family HMM PF02661.	0.550
prmA	dnaJ	FSU_1561	FSU_0184	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	0.857
prmA	putP	FSU_1561	FSU_2643	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	0.423
prmA	rlmH	FSU_1561	FSU_0414	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	0.416
prmA	rplK	FSU_1561	FSU_1738	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.857
prmA	rsmB	FSU_1561	FSU_2777	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	Ribosomal RNA small subunit methyltransferase B; Identified by match to protein family HMM PF01029; match to protein family HMM PF01189; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.448
putP	prmA	FSU_2643	FSU_1561	Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	0.423
rlmH	prmA	FSU_0414	FSU_1561	Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.	Ribosomal protein L11 methyltransferase; Identified by similarity to SP:P28637; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241.	0.416
rplK	dnaJ	FSU_1738	FSU_0184	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]	0.823

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