recD protein (Fibrobacter succinogenes) - STRING interaction network

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Score

recD

Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993. (706 aa)

Predicted Functional Partners:

recB

0.980

FSU_1321

0.873

dnaN

0.670

FSU_1646

0.568

hepA

0.497

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_1321	dnaN	FSU_1321	FSU_1802	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.924
FSU_1321	hepA	FSU_1321	FSU_0598	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	0.959
FSU_1321	recB	FSU_1321	FSU_1644	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	Exodeoxyribonuclease V, beta subunit; Identified by similarity to SP:P08394; match to protein family HMM PF00580.	0.647
FSU_1321	recD	FSU_1321	FSU_1645	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	0.873
FSU_1646	recB	FSU_1646	FSU_1644	Hypothetical protein; Identified by glimmer; putative.	Exodeoxyribonuclease V, beta subunit; Identified by similarity to SP:P08394; match to protein family HMM PF00580.	0.568
FSU_1646	recD	FSU_1646	FSU_1645	Hypothetical protein; Identified by glimmer; putative.	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	0.568
dnaN	FSU_1321	FSU_1802	FSU_1321	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	0.924
dnaN	hepA	FSU_1802	FSU_0598	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	0.712
dnaN	recD	FSU_1802	FSU_1645	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	0.670
hepA	FSU_1321	FSU_0598	FSU_1321	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	0.959
hepA	dnaN	FSU_0598	FSU_1802	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.712
hepA	recB	FSU_0598	FSU_1644	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	Exodeoxyribonuclease V, beta subunit; Identified by similarity to SP:P08394; match to protein family HMM PF00580.	0.467
hepA	recD	FSU_0598	FSU_1645	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	0.497
recB	FSU_1321	FSU_1644	FSU_1321	Exodeoxyribonuclease V, beta subunit; Identified by similarity to SP:P08394; match to protein family HMM PF00580.	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	0.647
recB	FSU_1646	FSU_1644	FSU_1646	Exodeoxyribonuclease V, beta subunit; Identified by similarity to SP:P08394; match to protein family HMM PF00580.	Hypothetical protein; Identified by glimmer; putative.	0.568
recB	hepA	FSU_1644	FSU_0598	Exodeoxyribonuclease V, beta subunit; Identified by similarity to SP:P08394; match to protein family HMM PF00580.	RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.	0.467
recB	recD	FSU_1644	FSU_1645	Exodeoxyribonuclease V, beta subunit; Identified by similarity to SP:P08394; match to protein family HMM PF00580.	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	0.980
recD	FSU_1321	FSU_1645	FSU_1321	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	ATP-dependent DNA helicase, RecQ family/UvrD/REP helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.	0.873
recD	FSU_1646	FSU_1645	FSU_1646	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	Hypothetical protein; Identified by glimmer; putative.	0.568
recD	dnaN	FSU_1645	FSU_1802	Exodeoxyribonuclease V, alpha subunit; Identified by similarity to SP:P04993.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.670