STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1648Conserved hypothetical protein; Identified by similarity to GB:AAM05519.1; match to protein family HMM PF04326. (478 aa)    
Predicted Functional Partners:
FSU_1767
Conserved hypothetical protein; Identified by similarity to GB:AAO77119.1.
  
     0.655
FSU_2566
Conserved hypothetical protein; Identified by similarity to GB:AAN24897.1.
  
     0.642
FSU_1647
Conserved domain protein; Identified by similarity to GB:BAC95004.1.
       0.584
FSU_2222
Archaeal ATPase family protein; Identified by similarity to GB:AAN24006.1; match to protein family HMM PF01637; match to protein family HMM PF03008.
  
     0.564
FSU_1522
Conserved hypothetical protein; Identified by similarity to PIR:H90304.
  
     0.531
FSU_2204
Conserved hypothetical protein.
  
     0.512
FSU_2042
CRISPR-associated RAMP protein; Identified by similarity to GB:BAC97566.1; match to protein family HMM PF03787.
  
     0.502
dinD
DNA-damage-inducible protein D; Identified by similarity to SP:P23840.
       0.440
FSU_3217
Conserved domain protein; Identified by similarity to GB:AAO77512.1.
  
     0.409
FSU_2044
CRISPR-associated protein, TM1792/TM1809 family; Identified by match to protein family HMM PF03787.
  
     0.404
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.