FSU_1663 protein (Fibrobacter succinogenes) - STRING interaction network

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Score

FSU_1663

HD domain protein; Identified by match to protein family HMM PF01966. (189 aa)

Predicted Functional Partners:

FSU_1662

0.846

rplR

0.800

suhB

0.789

rpsM

0.786

rplK

0.785

FSU_1664

0.783

rplV

0.783

rplM

0.762

rpmI

0.756

rpsE

0.756

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_1662	FSU_1663	FSU_1662	FSU_1663	RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.	HD domain protein; Identified by match to protein family HMM PF01966.	0.846
FSU_1662	FSU_1664	FSU_1662	FSU_1664	RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.	Conserved hypothetical protein; Identified by match to protein family HMM PF04402.	0.777
FSU_1663	FSU_1662	FSU_1663	FSU_1662	HD domain protein; Identified by match to protein family HMM PF01966.	RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.	0.846
FSU_1663	FSU_1664	FSU_1663	FSU_1664	HD domain protein; Identified by match to protein family HMM PF01966.	Conserved hypothetical protein; Identified by match to protein family HMM PF04402.	0.783
FSU_1663	rplK	FSU_1663	FSU_1738	HD domain protein; Identified by match to protein family HMM PF01966.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.785
FSU_1663	rplM	FSU_1663	FSU_1421	HD domain protein; Identified by match to protein family HMM PF01966.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.762
FSU_1663	rplR	FSU_1663	FSU_1874	HD domain protein; Identified by match to protein family HMM PF01966.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.800
FSU_1663	rplV	FSU_1663	FSU_1885	HD domain protein; Identified by match to protein family HMM PF01966.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.783
FSU_1663	rpmI	FSU_1663	FSU_1235	HD domain protein; Identified by match to protein family HMM PF01966.	Ribosomal protein L35; Identified by similarity to SP:P07085; match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.	0.756
FSU_1663	rpsE	FSU_1663	FSU_1873	HD domain protein; Identified by match to protein family HMM PF01966.	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.756
FSU_1663	rpsM	FSU_1663	FSU_1867	HD domain protein; Identified by match to protein family HMM PF01966.	Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.786
FSU_1663	suhB	FSU_1663	FSU_0056	HD domain protein; Identified by match to protein family HMM PF01966.	Inositol-1-monophosphatase; Identified by similarity to SP:P22783; match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.	0.789
FSU_1664	FSU_1662	FSU_1664	FSU_1662	Conserved hypothetical protein; Identified by match to protein family HMM PF04402.	RelA/SpoT domain protein; Identified by match to protein family HMM PF04607.	0.777
FSU_1664	FSU_1663	FSU_1664	FSU_1663	Conserved hypothetical protein; Identified by match to protein family HMM PF04402.	HD domain protein; Identified by match to protein family HMM PF01966.	0.783
rplK	FSU_1663	FSU_1738	FSU_1663	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	HD domain protein; Identified by match to protein family HMM PF01966.	0.785
rplK	rplM	FSU_1738	FSU_1421	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.989
rplK	rplR	FSU_1738	FSU_1874	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.996
rplK	rplV	FSU_1738	FSU_1885	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.992
rplK	rpmI	FSU_1738	FSU_1235	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L35; Identified by similarity to SP:P07085; match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.	0.988
rplK	rpsE	FSU_1738	FSU_1873	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.988