Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| FSU_0250 | FSU_0511 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.892 |
| FSU_0250 | FSU_0851 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.652 |
| FSU_0250 | FSU_1687 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by similarity to PIR:S75333; match to protein family HMM PF00005. | 0.805 |
| FSU_0250 | FSU_1688 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.812 |
| FSU_0250 | FSU_1689 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P24139; match to protein family HMM PF00528. | 0.882 |
| FSU_0250 | FSU_1691 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Identified by similarity to PIR:A72429; match to protein family HMM PF00496. | 0.544 |
| FSU_0250 | FSU_2542 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.814 |
| FSU_0250 | FSU_2760 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL01RS1379; match to protein family HMM PF00005. | 0.826 |
| FSU_0511 | FSU_0250 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.892 |
| FSU_0511 | FSU_0851 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.975 |
| FSU_0511 | FSU_1181 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.900 |
| FSU_0511 | FSU_1687 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by similarity to PIR:S75333; match to protein family HMM PF00005. | 0.965 |
| FSU_0511 | FSU_1688 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.923 |
| FSU_0511 | FSU_1689 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Putative oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P24139; match to protein family HMM PF00528. | 0.999 |
| FSU_0511 | FSU_1690 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Putative oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to PIR:H75068; match to protein family HMM PF00528. | 0.995 |
| FSU_0511 | FSU_1691 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Putative oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Identified by similarity to PIR:A72429; match to protein family HMM PF00496. | 0.954 |
| FSU_0511 | FSU_2542 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | 0.798 |
| FSU_0511 | FSU_2760 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | ABC transporter, ATP-binding protein; Identified by similarity to OMNI:NTL01RS1379; match to protein family HMM PF00005. | 0.655 |
| FSU_0851 | FSU_0250 | Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.652 |
| FSU_0851 | FSU_0511 | Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. | 0.975 |
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