STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1691Putative oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Identified by similarity to PIR:A72429; match to protein family HMM PF00496. (605 aa)    
Predicted Functional Partners:
FSU_1689
Putative oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P24139; match to protein family HMM PF00528.
 
 0.996
FSU_1690
Putative oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to PIR:H75068; match to protein family HMM PF00528.
 
 0.996
FSU_1688
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
 0.994
FSU_1687
Putative oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by similarity to PIR:S75333; match to protein family HMM PF00005.
 
 0.991
FSU_0511
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
 
 0.954
FSU_0851
Extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.
  
  
 
0.912
nifJ
Pyruvate synthase; Identified by similarity to SP:P52647; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
    0.845
FSU_0382
Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.
  
     0.660
FSU_0250
Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
   
 0.544
FSU_0661
Fimbrial assembly protein PilN; Identified by match to protein family HMM PF05137.
  
     0.526
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.