STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1697Identified by match to protein family HMM PF02470. (302 aa)    
Predicted Functional Partners:
yfiA
Ribosomal subunit interface protein; Identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741.
 
    0.811
hprK
Putative HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).
  
    0.773
FSU_1094
Conserved hypothetical protein.
  
 0.674
FSU_1181
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.669
FSU_1296
Putative membrane protein; Identified by match to protein family HMM PF02405.
 
 0.665
FSU_1182
Putative ABC transporter, permease protein; Identified by similarity to PIR:A97716; match to protein family HMM PF02405.
 
 0.614
FSU_0711
Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515.
  
 
   0.601
FSU_1606
Putative ABC transporter, permease protein; Identified by similarity to GB:AAP05370.1; match to protein family HMM PF02405.
 
 0.590
FSU_2721
Hypothetical protein; Identified by glimmer; putative.
  
     0.575
FSU_2764
Putative ABC transporter, permease protein; Identified by similarity to GB:BAC51330.1; match to protein family HMM PF02405.
 
 0.572
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.