rpoN protein (Fibrobacter succinogenes) - STRING interaction network

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rpoN

RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395. (543 aa)

Predicted Functional Partners:

FSU_1841

0.873

FSU_2733

0.873

rpoB

0.869

FSU_0812

0.846

FSU_1042

0.846

FSU_1579

0.846

FSU_2988

0.846

FSU_1702

0.821

FSU_1701

0.816

FSU_1703

0.812

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0812	FSU_2733	FSU_0812	FSU_2733	Sigma-54 dependent DNA-binding response regulator; Identified by similarity to GB:AAR35365.1; match to protein family HMM PF00158; match to protein family HMM PF02954.	Sigma-54 dependent regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.	0.437
FSU_0812	rpoN	FSU_0812	FSU_1700	Sigma-54 dependent DNA-binding response regulator; Identified by similarity to GB:AAR35365.1; match to protein family HMM PF00158; match to protein family HMM PF02954.	RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.	0.846
FSU_1042	FSU_2733	FSU_1042	FSU_2733	Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF02954.	Sigma-54 dependent regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.	0.433
FSU_1042	rpoN	FSU_1042	FSU_1700	Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF02954.	RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.	0.846
FSU_1579	FSU_2733	FSU_1579	FSU_2733	Putative nitrogen fixation protein; Identified by similarity to SP:P12626; match to protein family HMM PF00158; match to protein family HMM PF02954.	Sigma-54 dependent regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.	0.438
FSU_1579	rpoN	FSU_1579	FSU_1700	Putative nitrogen fixation protein; Identified by similarity to SP:P12626; match to protein family HMM PF00158; match to protein family HMM PF02954.	RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.	0.846
FSU_1701	FSU_1702	FSU_1701	FSU_1702	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved domain protein; Identified by similarity to GB:AAO78954.1.	0.974
FSU_1701	FSU_1703	FSU_1701	FSU_1703	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Hypothetical protein; Identified by glimmer; putative.	0.998
FSU_1701	rpoN	FSU_1701	FSU_1700	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.	0.816
FSU_1702	FSU_1701	FSU_1702	FSU_1701	Conserved domain protein; Identified by similarity to GB:AAO78954.1.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.974
FSU_1702	FSU_1703	FSU_1702	FSU_1703	Conserved domain protein; Identified by similarity to GB:AAO78954.1.	Hypothetical protein; Identified by glimmer; putative.	0.975
FSU_1702	rpoN	FSU_1702	FSU_1700	Conserved domain protein; Identified by similarity to GB:AAO78954.1.	RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.	0.821
FSU_1703	FSU_1701	FSU_1703	FSU_1701	Hypothetical protein; Identified by glimmer; putative.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.998
FSU_1703	FSU_1702	FSU_1703	FSU_1702	Hypothetical protein; Identified by glimmer; putative.	Conserved domain protein; Identified by similarity to GB:AAO78954.1.	0.975
FSU_1703	rpoN	FSU_1703	FSU_1700	Hypothetical protein; Identified by glimmer; putative.	RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.	0.812
FSU_1841	rpoN	FSU_1841	FSU_1700	Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF02954.	RNA polymerase sigma-54 factor; Identified by similarity to GB:AAF29509.1; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395.	0.873
FSU_2733	FSU_0812	FSU_2733	FSU_0812	Sigma-54 dependent regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.	Sigma-54 dependent DNA-binding response regulator; Identified by similarity to GB:AAR35365.1; match to protein family HMM PF00158; match to protein family HMM PF02954.	0.437
FSU_2733	FSU_1042	FSU_2733	FSU_1042	Sigma-54 dependent regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.	Sigma-54 dependent transcriptional regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF02954.	0.433
FSU_2733	FSU_1579	FSU_2733	FSU_1579	Sigma-54 dependent regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.	Putative nitrogen fixation protein; Identified by similarity to SP:P12626; match to protein family HMM PF00158; match to protein family HMM PF02954.	0.438
FSU_2733	FSU_2988	FSU_2733	FSU_2988	Sigma-54 dependent regulator; Identified by match to protein family HMM PF00158; match to protein family HMM PF07728.	Sigma-54 dependent transcriptional regulator, Fis family; Identified by similarity to SP:P71229; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728.	0.431

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