STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_1759Conserved hypothetical protein; Identified by similarity to GB:AAO36877.1. (159 aa)    
Predicted Functional Partners:
FSU_1758
Hypothetical protein; Identified by glimmer; putative.
       0.779
FSU_1757
Putative type III restriction-modification system, Res subunit; Possibly an isoschizomer of BfaORFC196P found in Bacteroides fragilis; identified by match to protein family HMM PF04851.
       0.773
FSU_1756
Conserved hypothetical protein; Identified by similarity to GB:AAM31899.1.
       0.566
FSU_1036
Conserved hypothetical protein; Identified by similarity to GB:AAO76294.1.
  
     0.506
FSU_2339
Identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384.
  
     0.425
FSU_2327
Conserved hypothetical protein; Identified by similarity to GB:AAO35972.1.
  
     0.413
FSU_2681
Hypothetical protein; Identified by glimmer; putative.
  
     0.410
FSU_1761
Conserved hypothetical protein; Identified by similarity to GB:AAP77658.1; match to protein family HMM PF03235; match to protein family HMM PF07510.
       0.402
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.