Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FSU_1947Putative endoglucanase; Identified by match to protein family HMM PF02015. (522 aa)    
Predicted Functional Partners:
FSU_2741
Putative xylanase; Identified by match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.775
xynC
Endo-1,4-beta-xylanase; Cleaves xylans with the production of xylose, xylobiose and xylo-oligosaccharides.
  
  
  0.771
FSU_3006
Putative endo-1,4-beta-xylanase; Identified by similarity to SP:P35811; match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.768
FSU_2898
Putative lipoprotein.
  
    0.744
FSU_2181
Beta-1,4-mannanase, Man26A; Identified by similarity to SP:P55298; match to protein family HMM PF02156; match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 26 family.
  
     0.736
FSU_1165
Beta-1,4-mannanase, man26B; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
  
     0.734
FSU_2054
Esterase D domain protein; Identified by similarity to PIR:S36781.
  
     0.719
FSU_1167
Beta-1,4-mannanase, man26C; Identified by similarity to SP:P55296; match to protein family HMM PF02156; match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 26 family.
  
     0.715
FSU_2468
Esterase domain protein; Identified by similarity to GB:CAC85738.1.
  
     0.711
FSU_0622
Putative membrane protein; Identified by match to protein family HMM PF08305.
  
     0.706
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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