FSU_1956 protein (Fibrobacter succinogenes) - STRING interaction network

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Score

FSU_1956

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (628 aa)

Predicted Functional Partners:

rplU

0.777

rpsC

0.771

rpsO

0.766

rpmD

0.765

rplT

0.764

rpmH

0.764

FSU_1957

0.762

rpsG

0.761

rpmA

0.760

rplC

0.758

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_1956	FSU_1957	FSU_1956	FSU_1957	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative lipoprotein.	0.762
FSU_1956	rplC	FSU_1956	FSU_1890	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.758
FSU_1956	rplT	FSU_1956	FSU_1234	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.764
FSU_1956	rplU	FSU_1956	FSU_0312	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.777
FSU_1956	rpmA	FSU_1956	FSU_0311	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.760
FSU_1956	rpmD	FSU_1956	FSU_1872	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein L30; Identified by similarity to SP:P02430; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.765
FSU_1956	rpmH	FSU_1956	FSU_2245	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein L34; Identified by similarity to SP:P05647; match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.764
FSU_1956	rpsC	FSU_1956	FSU_1884	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.771
FSU_1956	rpsG	FSU_1956	FSU_1731	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.761
FSU_1956	rpsO	FSU_1956	FSU_2944	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.766
FSU_1957	FSU_1956	FSU_1957	FSU_1956	Putative lipoprotein.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.762
rplC	FSU_1956	FSU_1890	FSU_1956	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.758
rplC	rplT	FSU_1890	FSU_1234	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.990
rplC	rplU	FSU_1890	FSU_0312	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.988
rplC	rpmA	FSU_1890	FSU_0311	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.	0.989
rplC	rpmD	FSU_1890	FSU_1872	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L30; Identified by similarity to SP:P02430; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.996
rplC	rpmH	FSU_1890	FSU_2245	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L34; Identified by similarity to SP:P05647; match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.	0.927
rplC	rpsC	FSU_1890	FSU_1884	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.996
rplC	rpsG	FSU_1890	FSU_1731	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.991
rplC	rpsO	FSU_1890	FSU_2944	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.986