FSU_1999 protein (Fibrobacter succinogenes) - STRING interaction network

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FSU_1999

RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily. (236 aa)

Predicted Functional Partners:

FSU_2935

0.897

rpoB

0.781

FSU_2000

0.675

FSU_2001

0.675

FSU_1631

0.584

FSU_1998

0.555

FSU_2002

0.553

rpoC_1

0.500

rpoC_2

0.500

FSU_0929

0.407

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0929	FSU_1999	FSU_0929	FSU_1999	Hydrolase, haloacid dehalogenase family; Identified by match to protein family HMM PF00702.	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.407
FSU_1631	FSU_1999	FSU_1631	FSU_1999	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.584
FSU_1631	FSU_2935	FSU_1631	FSU_2935	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Identified by glimmer; putative.	0.897
FSU_1631	rpoB	FSU_1631	FSU_1734	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.781
FSU_1631	rpoC_1	FSU_1631	FSU_1450	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.500
FSU_1631	rpoC_2	FSU_1631	FSU_1733	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.500
FSU_1998	FSU_1999	FSU_1998	FSU_1999	Putative membrane protein; Identified by similarity to GB:AAP05710.1.	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.555
FSU_1998	FSU_2000	FSU_1998	FSU_2000	Putative membrane protein; Identified by similarity to GB:AAP05710.1.	Antigen-like protein; Identified by similarity to GB:AAQ66633.1.	0.490
FSU_1998	FSU_2001	FSU_1998	FSU_2001	Putative membrane protein; Identified by similarity to GB:AAP05710.1.	Putative lipoprotein.	0.490
FSU_1998	FSU_2002	FSU_1998	FSU_2002	Putative membrane protein; Identified by similarity to GB:AAP05710.1.	Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.	0.420
FSU_1999	FSU_0929	FSU_1999	FSU_0929	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Hydrolase, haloacid dehalogenase family; Identified by match to protein family HMM PF00702.	0.407
FSU_1999	FSU_1631	FSU_1999	FSU_1631	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	0.584
FSU_1999	FSU_1998	FSU_1999	FSU_1998	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Putative membrane protein; Identified by similarity to GB:AAP05710.1.	0.555
FSU_1999	FSU_2000	FSU_1999	FSU_2000	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Antigen-like protein; Identified by similarity to GB:AAQ66633.1.	0.675
FSU_1999	FSU_2001	FSU_1999	FSU_2001	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Putative lipoprotein.	0.675
FSU_1999	FSU_2002	FSU_1999	FSU_2002	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Identified by match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.	0.553
FSU_1999	FSU_2935	FSU_1999	FSU_2935	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	Hypothetical protein; Identified by glimmer; putative.	0.897
FSU_1999	rpoB	FSU_1999	FSU_1734	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.781
FSU_1999	rpoC_1	FSU_1999	FSU_1450	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.500
FSU_1999	rpoC_2	FSU_1999	FSU_1733	RNA polymerase sigma-70 factor family protein; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. ECF subfamily.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.500

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