FSU_2012 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Score

FSU_2012

Putative chitinase; Identified by match to protein family HMM PF00704. (350 aa)

Predicted Functional Partners:

FSU_0622

0.747

FSU_0382

0.729

FSU_2011

0.723

FSU_0522

0.714

FSU_2010

0.712

FSU_1310

0.685

FSU_2009

0.675

FSU_0816

0.670

FSU_1947

0.663

FSU_1095

0.657

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
FSU_0382	FSU_0522	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.766
FSU_0382	FSU_0622	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	Putative membrane protein; Identified by match to protein family HMM PF08305.	0.774
FSU_0382	FSU_0816	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	Putative membrane protein; Identified by match to protein family HMM PF08305.	0.755
FSU_0382	FSU_1095	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.752
FSU_0382	FSU_1310	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	Hypothetical protein; Identified by glimmer; putative.	0.770
FSU_0382	FSU_1947	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	Putative endoglucanase; Identified by match to protein family HMM PF02015.	0.679
FSU_0382	FSU_2012	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	Putative chitinase; Identified by match to protein family HMM PF00704.	0.729
FSU_0522	FSU_0382	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	0.766
FSU_0522	FSU_0622	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative membrane protein; Identified by match to protein family HMM PF08305.	0.786
FSU_0522	FSU_0816	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative membrane protein; Identified by match to protein family HMM PF08305.	0.784
FSU_0522	FSU_1095	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.785
FSU_0522	FSU_1310	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Hypothetical protein; Identified by glimmer; putative.	0.818
FSU_0522	FSU_1947	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative endoglucanase; Identified by match to protein family HMM PF02015.	0.704
FSU_0522	FSU_2012	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative chitinase; Identified by match to protein family HMM PF00704.	0.714
FSU_0622	FSU_0382	Putative membrane protein; Identified by match to protein family HMM PF08305.	Cellulase; Identified by similarity to GB:AAC45377.1; match to protein family HMM PF03425.	0.774
FSU_0622	FSU_0522	Putative membrane protein; Identified by match to protein family HMM PF08305.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.786
FSU_0622	FSU_1095	Putative membrane protein; Identified by match to protein family HMM PF08305.	Outer membrane efflux protein; Identified by match to protein family HMM PF02321.	0.774
FSU_0622	FSU_1310	Putative membrane protein; Identified by match to protein family HMM PF08305.	Hypothetical protein; Identified by glimmer; putative.	0.775
FSU_0622	FSU_1947	Putative membrane protein; Identified by match to protein family HMM PF08305.	Putative endoglucanase; Identified by match to protein family HMM PF02015.	0.706
FSU_0622	FSU_2012	Putative membrane protein; Identified by match to protein family HMM PF08305.	Putative chitinase; Identified by match to protein family HMM PF00704.	0.747