STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2052Esterase D domain protein; Identified by similarity to PIR:S36781. (504 aa)    
Predicted Functional Partners:
FSU_2610
Glycosyl hydrolase-like protein; Identified by similarity to GB:CAD86595.1; match to protein family HMM PF00754.
  
     0.764
FSU_1996
Lipase domain protein; Identified by similarity to GB:AAF87662.1.
 
     0.762
FSU_2270
Putative esterase; Identified by similarity to SP:Q9Y871; match to protein family HMM PF02018; match to protein family HMM PF02230.
  
     0.760
FSU_0577
Putative pectate lyase; Identified by match to protein family HMM PF00544.
  
     0.756
FSU_1995
Lipase domain protein; Identified by similarity to GB:AAF87662.1.
 
     0.751
FSU_2304
Identified by match to protein family HMM PF01522.
  
     0.750
FSU_1954
Conserved domain protein; Identified by similarity to GB:AAO52466.1; match to protein family HMM TIGR02148.
  
     0.746
FSU_0182
Glycosyl hydrolase family protein.
  
     0.745
FSU_2290
Carbohydrate-binding protein, CBM6 family; Identified by match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.745
FSU_2914
Cellulase; Identified by similarity to GB:AAC49731.1; match to protein family HMM PF00150.
  
     0.745
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.