Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2056Outer membrane efflux protein; Identified by match to protein family HMM PF02321. (432 aa)    
Predicted Functional Partners:
FSU_2553
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.860
FSU_1331
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
  
  0.856
FSU_0700
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
  
  
  0.838
FSU_1330
Conserved hypothetical protein; Identified by similarity to GB:AAO79009.1; match to protein family HMM PF00529.
 
 0.826
FSU_0701
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.803
FSU_0898
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.792
FSU_1359
Conserved domain protein; Identified by similarity to GB:AAO77279.1; match to protein family HMM PF07715.
  
   
 0.622
FSU_2125
Putative lipoprotein.
  
     0.551
FSU_1095
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
     
  0.540
FSU_1933
Conserved hypothetical protein; Identified by match to protein family HMM PF00328.
  
     0.517
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.