FSU_2141 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

FSU_2141

Identified by match to protein family HMM PF02470. (323 aa)

Predicted Functional Partners:

FSU_1697

0.944

FSU_1449

0.924

FSU_1606

0.907

FSU_2762

0.900

FSU_1094

0.897

FSU_1296

0.885

FSU_1182

0.883

FSU_1607

0.880

FSU_2764

0.865

FSU_1181

0.860

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
FSU_1094	FSU_1181	Conserved hypothetical protein.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.838
FSU_1094	FSU_1182	Conserved hypothetical protein.	Putative ABC transporter, permease protein; Identified by similarity to PIR:A97716; match to protein family HMM PF02405.	0.833
FSU_1094	FSU_1296	Conserved hypothetical protein.	Putative membrane protein; Identified by match to protein family HMM PF02405.	0.833
FSU_1094	FSU_1449	Conserved hypothetical protein.	Identified by match to protein family HMM PF02470.	0.897
FSU_1094	FSU_1606	Conserved hypothetical protein.	Putative ABC transporter, permease protein; Identified by similarity to GB:AAP05370.1; match to protein family HMM PF02405.	0.833
FSU_1094	FSU_1607	Conserved hypothetical protein.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.838
FSU_1094	FSU_1697	Conserved hypothetical protein.	Identified by match to protein family HMM PF02470.	0.897
FSU_1094	FSU_2141	Conserved hypothetical protein.	Identified by match to protein family HMM PF02470.	0.897
FSU_1094	FSU_2762	Conserved hypothetical protein.	Identified by match to protein family HMM PF02470.	0.897
FSU_1094	FSU_2764	Conserved hypothetical protein.	Putative ABC transporter, permease protein; Identified by similarity to GB:BAC51330.1; match to protein family HMM PF02405.	0.833
FSU_1181	FSU_1094	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved hypothetical protein.	0.838
FSU_1181	FSU_1182	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative ABC transporter, permease protein; Identified by similarity to PIR:A97716; match to protein family HMM PF02405.	0.995
FSU_1181	FSU_1296	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative membrane protein; Identified by match to protein family HMM PF02405.	0.978
FSU_1181	FSU_1449	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF02470.	0.947
FSU_1181	FSU_1606	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative ABC transporter, permease protein; Identified by similarity to GB:AAP05370.1; match to protein family HMM PF02405.	0.978
FSU_1181	FSU_1607	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.922
FSU_1181	FSU_1697	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF02470.	0.915
FSU_1181	FSU_2141	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF02470.	0.860
FSU_1181	FSU_2762	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF02470.	0.878
FSU_1181	FSU_2764	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative ABC transporter, permease protein; Identified by similarity to GB:BAC51330.1; match to protein family HMM PF02405.	0.978