STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2156Phosphoadenosine phosphosulfate reductase domain protein; Identified by match to protein family HMM PF01507. (579 aa)    
Predicted Functional Partners:
FSU_0547
Putative adenylylsulfate reductase, alpha subunit; Identified by similarity to GB:CAA93322.1; match to protein family HMM PF00890; match to protein family HMM PF03486; match to protein family HMM PF07992.
  
 0.985
cysN
Sulfate adenylyltransferase, subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 
 0.970
FSU_2157
Conserved hypothetical protein; Identified by similarity to GB:AAL94641.1.
 
     0.951
FSU_2158
Conserved hypothetical protein; Identified by similarity to GB:AAL94642.1.
 
     0.951
FSU_2159
Identified by match to protein family HMM PF00266; match to protein family HMM TIGR01977.
   
 0.944
FSU_2160
Helicase domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851.
 
     0.938
FSU_0548
Ferredoxin; Identified by match to protein family HMM PF00037.
  
 
 0.922
FSU_0546
Putative sulfite reductase; Identified by similarity to SP:P26476; match to protein family HMM PF00037; match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.917
FSU_0639
DHH subfamily 1 protein; Identified by similarity to GB:AAM92024.1; match to protein family HMM PF01368; match to protein family HMM PF02272.
   
 
  0.900
nifJ
Pyruvate synthase; Identified by similarity to SP:P52647; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
  
 0.898
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.