STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2192Phosphate transporter family protein. (744 aa)    
Predicted Functional Partners:
phoB
Phosphate regulon transcriptional regulatory protein PhoB; Identified by similarity to SP:P08402; match to protein family HMM PF00072; match to protein family HMM PF00486.
     
 0.791
FSU_2194
Sensor histidine kinase; Identified by similarity to PIR:H97109; match to protein family HMM PF00512; match to protein family HMM PF02518.
     
 0.775
FSU_1905
Conserved hypothetical protein; Identified by similarity to GB:AAM71309.1.
  
     0.735
FSU_1306
Putative BatE protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
  
     0.685
FSU_0300
Siroheme synthase; Identified by match to protein family HMM PF01903; match to protein family HMM TIGR01470.
  
  
 0.670
FSU_1305
Putative BatD protein.
  
     0.621
FSU_1594
Putative isopentenyl-diphosphate delta-isomerase; Identified by match to protein family HMM PF00293.
  
     0.540
gltB
Glutamate synthase, large subunit; Identified by similarity to SP:P39812; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
  
  
 0.527
FSU_0669
Peptidase, M23/M37 family; Identified by match to protein family HMM PF01551.
  
     0.497
FSU_2603
Putative membrane protein; Identified by match to protein family HMM PF00892.
  
     0.483
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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