STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2204Conserved hypothetical protein. (405 aa)    
Predicted Functional Partners:
FSU_2566
Conserved hypothetical protein; Identified by similarity to GB:AAN24897.1.
  
     0.650
FSU_3217
Conserved domain protein; Identified by similarity to GB:AAO77512.1.
  
     0.650
FSU_2222
Archaeal ATPase family protein; Identified by similarity to GB:AAN24006.1; match to protein family HMM PF01637; match to protein family HMM PF03008.
  
     0.647
FSU_1767
Conserved hypothetical protein; Identified by similarity to GB:AAO77119.1.
  
     0.635
FSU_2205
Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
       0.588
FSU_1418
Conserved hypothetical protein; Identified by similarity to GB:AAM05757.1; match to protein family HMM PF04326.
  
     0.587
FSU_2203
Oxidoreductase, aldo/keto reductase family; Identified by match to protein family HMM PF00248.
       0.513
FSU_1648
Conserved hypothetical protein; Identified by similarity to GB:AAM05519.1; match to protein family HMM PF04326.
  
     0.512
FSU_2590
Helix-turn-helix DNA-binding domain protein.
  
     0.497
FSU_1564
Helix-turn-helix DNA-binding domain protein; Identified by match to protein family HMM PF04326.
  
     0.423
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.