STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2290Carbohydrate-binding protein, CBM6 family; Identified by match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (552 aa)    
Predicted Functional Partners:
FSU_2914
Cellulase; Identified by similarity to GB:AAC49731.1; match to protein family HMM PF00150.
  
     0.759
FSU_0810
Glycosyl hydrolase, family 9; Identified by similarity to SP:P04954; match to protein family HMM PF00041; match to protein family HMM PF00759.
  
     0.752
FSU_2610
Glycosyl hydrolase-like protein; Identified by similarity to GB:CAD86595.1; match to protein family HMM PF00754.
  
     0.752
FSU_0809
Glycosyl hydrolase, family 9; Identified by similarity to SP:P26221; match to protein family HMM PF00759.
  
     0.745
FSU_2052
Esterase D domain protein; Identified by similarity to PIR:S36781.
  
     0.745
FSU_1114
Carbohydrate-binding protein, CBM 6 family; Identified by match to protein family HMM PF03422; match to protein family HMM PF09492; match to protein family HMM TIGR02474.
  
     0.735
FSU_2054
Esterase D domain protein; Identified by similarity to PIR:S36781.
  
     0.734
FSU_2516
Putative pectate lyase; Identified by similarity to PIR:JC7271.
  
     0.733
FSU_0459
Conserved hypothetical protein.
  
     0.722
FSU_0196
Putative mannanase; Identified by similarity to SP:P51529; match to protein family HMM PF00150; match to protein family HMM PF02018; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.716
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.