STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
FSU_2329Conserved domain protein; Identified by similarity to GB:BAC15296.1. (1215 aa)    
Predicted Functional Partners:
FSU_3272
Conserved domain protein; Identified by match to protein family HMM PF04685.
    
 0.916
FSU_0252
Identified by match to protein family HMM PF00023.
  
 0.897
FSU_0415
Identified by match to protein family HMM PF00149.
   
 0.889
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.852
FSU_2995
Adenylate/guanylate cyclase domain protein; Identified by match to protein family HMM PF00211; match to protein family HMM PF05226.
    
 0.843
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
   
 0.816
FSU_2330
Conserved domain protein; Identified by similarity to GB:AAQ95759.1.
       0.789
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.779
hepA
RNA polymerase-associated protein HepA; Identified by similarity to SP:P23852; match to protein family HMM PF00176; match to protein family HMM PF00271.
   
 0.770
FSU_2331
Putative type III restriction-modification system, Mod subunit; Possibly an isoschizomer of M.NeuORF2309P found in Nitrosomonas europaea; identified by match to protein family HMM PF01555.
       0.768
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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