FSU_2456 protein (Fibrobacter succinogenes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

FSU_2456

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (539 aa)

Predicted Functional Partners:

FSU_3055

0.882

FSU_1466

0.873

FSU_2458

0.813

FSU_3272

0.807

FSU_2457

0.778

FSU_0504

0.752

FSU_0522

0.742

ispH

0.730

FSU_1661

0.719

FSU_0816

0.712

Your Current Organism:

Fibrobacter succinogenes

NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSU_0504	FSU_0522	FSU_0504	FSU_0522	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.552
FSU_0504	FSU_2456	FSU_0504	FSU_2456	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.752
FSU_0522	FSU_0504	FSU_0522	FSU_0504	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	0.552
FSU_0522	FSU_0816	FSU_0522	FSU_0816	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative membrane protein; Identified by match to protein family HMM PF08305.	0.788
FSU_0522	FSU_1661	FSU_0522	FSU_1661	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	0.518
FSU_0522	FSU_2456	FSU_0522	FSU_2456	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.742
FSU_0522	FSU_3272	FSU_0522	FSU_3272	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Conserved domain protein; Identified by match to protein family HMM PF04685.	0.780
FSU_0816	FSU_0522	FSU_0816	FSU_0522	Putative membrane protein; Identified by match to protein family HMM PF08305.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.788
FSU_0816	FSU_1661	FSU_0816	FSU_1661	Putative membrane protein; Identified by match to protein family HMM PF08305.	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	0.514
FSU_0816	FSU_2456	FSU_0816	FSU_2456	Putative membrane protein; Identified by match to protein family HMM PF08305.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.712
FSU_0816	FSU_2458	FSU_0816	FSU_2458	Putative membrane protein; Identified by match to protein family HMM PF08305.	Putative 3-deoxy-D-manno-2-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.	0.436
FSU_0816	FSU_3272	FSU_0816	FSU_3272	Putative membrane protein; Identified by match to protein family HMM PF08305.	Conserved domain protein; Identified by match to protein family HMM PF04685.	0.712
FSU_1466	FSU_1661	FSU_1466	FSU_1661	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	0.641
FSU_1466	FSU_2456	FSU_1466	FSU_2456	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.873
FSU_1661	FSU_0522	FSU_1661	FSU_0522	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.518
FSU_1661	FSU_0816	FSU_1661	FSU_0816	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	Putative membrane protein; Identified by match to protein family HMM PF08305.	0.514
FSU_1661	FSU_1466	FSU_1661	FSU_1466	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.641
FSU_1661	FSU_2456	FSU_1661	FSU_2456	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.719
FSU_1661	FSU_3055	FSU_1661	FSU_3055	Putative translation elongation factor G; Identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM TIGR00231.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.738
FSU_2456	FSU_0504	FSU_2456	FSU_0504	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	PDZ/thioredoxin domain protein; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534.	0.752