Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2527Conserved hypothetical protein; Identified by similarity to GB:AAO78185.1; match to protein family HMM PF08757. (473 aa)    
Predicted Functional Partners:
FSU_2150
Glycosyl hydrolase/glycosyltransferase; Identified by match to protein family HMM PF00150; match to protein family HMM PF00535.
 
 0.636
FSU_1167
Beta-1,4-mannanase, man26C; Identified by similarity to SP:P55296; match to protein family HMM PF02156; match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 26 family.
  
  
  0.484
FSU_2181
Beta-1,4-mannanase, Man26A; Identified by similarity to SP:P55298; match to protein family HMM PF02156; match to protein family HMM PF03422; Belongs to the glycosyl hydrolase 26 family.
  
  
  0.476
FSU_1165
Beta-1,4-mannanase, man26B; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
  
  
  0.469
FSU_2518
Esterase domain protein; Identified by similarity to SP:Q00017.
 
  0.443
FSU_2003
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
  
  
  0.436
FSU_0347
Cellulase; Identified by match to protein family HMM PF00150; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  0.433
FSU_1228
Putative cellulase; Identified by match to protein family HMM PF00150.
  
  0.422
FSU_3103
Acetyl xylan esterase/carboyhdrate-binding protein, CBM6 family; Identified by similarity to GB:AAC14690.1; match to protein family HMM PF03422; match to protein family HMM PF03629.
  
  0.421
FSU_2496
Identified by match to protein family HMM PF01522.
 
  
  0.416
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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