Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FSU_2681Hypothetical protein; Identified by glimmer; putative. (1994 aa)    
Predicted Functional Partners:
FSU_1981
Hypothetical protein; Identified by glimmer; putative.
  
     0.774
FSU_2102
Conserved domain protein; Identified by similarity to GB:AAQ59146.1.
  
     0.773
FSU_1339
Conserved domain protein; Identified by similarity to PIR:AF1772; match to protein family HMM TIGR02543.
  
     0.694
FSU_0307
Internalin domain protein; Identified by similarity to SP:P25146; match to protein family HMM PF09479; match to protein family HMM TIGR02543.
  
     0.601
FSU_1638
Hypothetical protein; Identified by glimmer; putative.
  
     0.588
FSU_2680
Bhp-like protein; Identified by similarity to GB:AAK29746.1.
  
  0.510
FSU_0004
NAD+ synthetase, glutamine-dependent; Identified by match to protein family HMM PF02540; match to protein family HMM TIGR00552; Belongs to the NAD synthetase family.
   
  0.494
nadE
NAD+ synthetase, glutamine-dependent; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
  0.494
FSU_2513
Putative lipoprotein.
   
    0.487
FSU_2678
Hypothetical protein; Identified by glimmer; putative.
 
  
 
0.473
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.