Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FSU_2730Protein kinase domain protein. (481 aa)    
Predicted Functional Partners:
FSU_2732
Von Willebrand factor type A domain protein; Identified by similarity to GB:AAR07664.1; match to protein family HMM PF00092.
 
     0.946
FSU_2729
Conserved domain protein; Identified by similarity to PIR:G64575.
 
    0.938
FSU_2727
Conserved domain protein; Identified by similarity to GB:AAP24919.1.
 
    0.937
FSU_2731
Conserved hypothetical protein; Identified by similarity to PIR:G64573.
  
 
 0.828
FSU_0494
Conserved hypothetical protein; Identified by similarity to GB:AAO58193.1.
 
 
 0.787
FSU_2726
Hypothetical protein; Identified by glimmer; putative.
       0.773
FSU_2728
Hypothetical protein; Identified by glimmer; putative.
       0.773
FSU_0537
Conserved domain protein; Identified by similarity to PIR:AC0074; match to protein family HMM PF00092.
  
     0.771
FSU_2029
Conserved hypothetical protein; Identified by similarity to GB:AAO58193.1.
 
 
 0.767
FSU_2028
Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092.
  
     0.758
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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