Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FSU_2740cysZ family protein. (258 aa)    
Predicted Functional Partners:
FSU_2739
HAD-superfamily hydrolase, subfamily IA, variant 3; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
       0.732
FSU_0621
Conserved domain protein; Identified by similarity to SP:Q8TTI1; match to protein family HMM PF04101.
  
     0.700
FSU_2741
Putative xylanase; Identified by match to protein family HMM PF00457; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
    0.570
FSU_0453
Identified by similarity to PIR:T48866; match to protein family HMM PF00483.
  
     0.540
FSU_2615
Plasmid maintenance system killer family protein.
  
     0.528
FSU_2883
Conserved hypothetical protein; Identified by similarity to PIR:G81669.
  
     0.466
FSU_0498
LPS O-antigen translocase; Identified by similarity to SP:P27834.
  
     0.432
Your Current Organism:
Fibrobacter succinogenes
NCBI taxonomy Id: 59374
Other names: F. succinogenes subsp. succinogenes S85, Fibrobacter succinogenes S85, Fibrobacter succinogenes subsp. succinogenes S85
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